BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033D11LP1|AL429741
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1355 1784 0.0
>3x_Contig1355
Length = 8652
Score = 1784 bits (900), Expect = 0.0
Identities = 903/904 (99%)
Strand = Plus / Minus
Query: 1 atccctgtatttacggggtaaactctcgatcaattaccacagtaaaaacaccactaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3539 atccctgtatttacggggtaaactctcgatcaattaccacagtaaaaacaccactaatat 3480
Query: 61 caggatatgaaacttaccgtatccaggtaaaaactgaacgattcttatttattaacattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3479 caggatatgaaacttaccgtatccaggtaaaaactgaacgattcttatttattaacattg 3420
Query: 121 aagaactagctgtgtttttagtagttaaactaagaagtgaatcttcaagccggcctctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3419 aagaactagctgtgtttttagtagttaaactaagaagtgaatcttcaagccggcctctat 3360
Query: 181 ctctttcaagtgaaaaacatctcgttacccgcaccatcttgtgccagggaaaagaaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3359 ctctttcaagtgaaaaacatctcgttacccgcaccatcttgtgccagggaaaagaaaaaa 3300
Query: 241 ttctttttgcttcgtttggttcgttctttaagttttgatgttctgttcagcatggaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3299 ttctttttgcttcgtttggttcgttctttaagttttgatgttctgttcagcatggaaaaa 3240
Query: 301 ccagaaacagtcaacttttgcagattaaacaattttgagaatagaacattggtcattgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3239 ccagaaacagtcaacttttgcagattaaacaattttgagaatagaacattggtcattgac 3180
Query: 361 taactctcttattttaactgcaacttaattttttttggaggccatttacagaagggcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3179 taactctcttattttaactgcaacttaattttttttggaggccatttacagaagggcagt 3120
Query: 421 taagtcttgaaaagtaccgggatttgtcagtgtacgggtactatatcaaggggccagtgg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3119 aaagtcttgaaaagtaccgggatttgtcagtgtacgggtactatatcaaggggccagtgg 3060
Query: 481 tttcagggagcctgattggtttgtgtatttaggttttttttgtttgctatctttctttgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3059 tttcagggagcctgattggtttgtgtatttaggttttttttgtttgctatctttctttgc 3000
Query: 541 ttagatagaaagaaagaacatatattaataacagtatcaatccgtttgaaaaaccaatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2999 ttagatagaaagaaagaacatatattaataacagtatcaatccgtttgaaaaaccaatct 2940
Query: 601 gattaatatcggttatccattttttttgggctcagtgtgtgatttttggtttctctcact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2939 gattaatatcggttatccattttttttgggctcagtgtgtgatttttggtttctctcact 2880
Query: 661 cgctcagtgtctcgatttatttataggtcgctgttgattttgttaggaataaaagtgatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2879 cgctcagtgtctcgatttatttataggtcgctgttgattttgttaggaataaaagtgatg 2820
Query: 721 ggattcattgcatctttattgtgtggttcaagcgattcggatagctctaggaaacagaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2819 ggattcattgcatctttattgtgtggttcaagcgattcggatagctctaggaaacagaag 2760
Query: 781 ggtaggaattcatcgtcaagtaacaatagtaataaaggttctagtgggtcaagctcggag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2759 ggtaggaattcatcgtcaagtaacaatagtaataaaggttctagtgggtcaagctcggag 2700
Query: 841 aaaagtaagagcaagaatacgctaagtgcaaagaagagtggacgtccaggggttgctgcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2699 aaaagtaagagcaagaatacgctaagtgcaaagaagagtggacgtccaggggttgctgcg 2640
Query: 901 actc 904
||||
Sbjct: 2639 actc 2636
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8619
Number of Sequences: 1807
Number of extensions: 8619
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)